Detailed information of deep learning profile BP000793.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000793.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR000ECW
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.17e-03 -2.13e-03 -3.83e-05 7.44e-02 -8.29e-05 8.29e-04 -5.14e-05 1.58e-05 4.14e-02 -5.32e-04 ]
C [ -8.31e-04 2.35e-03 1.22e-01 -2.83e-04 5.66e-02 1.28e-03 2.19e-05 3.41e-05 -5.28e-04 4.22e-02 ]
G [ 1.69e-02 -1.08e-03 1.25e-05 1.03e-04 1.20e-03 9.19e-02 -9.71e-06 1.28e-01 2.50e-04 -5.71e-04 ]
T [ -3.24e-03 1.10e-02 7.99e-06 -3.92e-04 6.49e-03 2.48e-06 9.33e-02 -5.89e-06 -7.95e-04 4.21e-03 ]

Frequency matrix

A [ 8824 3736 307 26690 442 3062 370 7 17562 1647 ]
C [ 5066 9065 29541 984 16431 2543 188 23 3706 17563 ]
G [ 13032 5263 48 668 3598 24246 220 29779 6231 3299 ]
T [ 2999 11856 24 1578 9449 69 29142 111 2422 7412 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001236.1 USF2 ENCSR513UQG IMR-90 Homo sapiens
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