Detailed information of deep learning profile BP000793.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000793.1
Cell line/tissue: HeLa-S3
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR000ECW
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.21e-03 -7.95e-04 -5.89e-06 9.33e-02 2.48e-06 6.49e-03 -3.92e-04 7.99e-06 1.10e-02 -3.24e-03 ]
C [ -5.71e-04 2.50e-04 1.28e-01 -9.71e-06 9.19e-02 1.20e-03 1.03e-04 1.25e-05 -1.08e-03 1.69e-02 ]
G [ 4.22e-02 -5.28e-04 3.41e-05 2.19e-05 1.28e-03 5.66e-02 -2.83e-04 1.22e-01 2.35e-03 -8.31e-04 ]
T [ -5.32e-04 4.14e-02 1.58e-05 -5.14e-05 8.29e-04 -8.29e-05 7.44e-02 -3.83e-05 -2.13e-03 5.17e-03 ]

Frequency matrix

A [ 7412 2422 111 29142 69 9449 1578 24 11856 2999 ]
C [ 3299 6231 29779 220 24246 3598 668 48 5263 13032 ]
G [ 17563 3706 23 188 2543 16431 984 29541 9065 5066 ]
T [ 1647 17562 7 370 3062 442 26690 307 3736 8824 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000226.1 USF2 ENCSR000EHG K562 Homo sapiens
BP000417.1 USF2 ENCSR145QNL HepG2 Homo sapiens
BP000448.1 USF2 ENCSR000EEF HepG2 Homo sapiens
BP000548.1 USF2 ENCSR563FBT A549 Homo sapiens
BP000554.1 USF2 ENCSR359NFW K562 Homo sapiens
BP000809.1 USF2 ENCSR000DZU GM12878 Homo sapiens
BP000863.1 USF2 ENCSR578KEN K562 Homo sapiens
BP000966.1 USF2 ENCSR000ECD H1 Homo sapiens
BP001081.1 USF2 ENCSR945NFL SK-N-SH Homo sapiens
BP001168.1 USF2 ENCSR229QAN WTC11 Homo sapiens
Showing 10 profiles of page 1 from 2 pages