Detailed information of deep learning profile BP000794.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000794.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR000BJA
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.93e-04 -4.21e-05 -3.64e-04 -3.97e-06 0.00e+00 -1.05e-05 8.48e-03 7.18e-07 -7.64e-04 -9.64e-05 ]
C [ 1.14e-02 3.93e-02 1.97e-05 4.37e-02 3.50e-02 3.31e-02 1.19e-02 5.34e-02 -1.54e-04 1.89e-02 ]
G [ -1.18e-04 5.38e-06 2.58e-02 2.30e-05 -1.09e-06 0.00e+00 -3.21e-06 0.00e+00 2.56e-02 3.87e-05 ]
T [ -2.22e-04 -6.44e-05 -4.92e-04 1.55e-06 1.57e-05 1.81e-04 0.00e+00 0.00e+00 -3.97e-04 1.37e-04 ]

Frequency matrix

A [ 5025 590 3167 66 114 383 6207 42 3898 2745 ]
C [ 34151 52871 6307 53718 47403 46356 32087 55434 11813 39597 ]
G [ 10322 731 31530 1579 3174 4654 8934 115 26051 8619 ]
T [ 6277 1582 14771 412 5085 4382 8546 184 14013 4813 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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