This page shows detailed deep learning-derived predictions and motifs for NFIC in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | NFIC |
| Model ID: | BP000795.1 |
| Cell line/tissue: | Ishikawa |
| Class: | SMAD/NF-1 DNA-binding domain factors |
| Family: | Nuclear factor 1 |
| Best Match(es): | MA0161.1 MA1527.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P08651 |
| Source: | ENCSR000BUT |
| Model: | BPNet |
| A [ | -3.31e-05 | 2.18e-06 | 0.00e+00 | 0.00e+00 | 1.12e-05 | 1.34e-02 | -2.55e-04 | -1.20e-03 | -4.05e-04 | 1.46e-03 | -6.56e-05 | -1.28e-03 | -1.73e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.63e-04 | 0.00e+00 | 0.00e+00 | 6.48e-06 | 5.42e-02 | -1.08e-04 | 4.64e-03 | 2.66e-03 | 2.34e-03 | 3.27e-05 | 4.84e-04 | 4.43e-03 | 2.02e-02 | ] |
| G [ | -1.77e-05 | -2.95e-06 | 7.63e-02 | 6.06e-02 | 0.00e+00 | 1.26e-05 | 3.50e-03 | 3.50e-03 | 3.08e-03 | 2.78e-03 | 2.37e-03 | 1.86e-04 | 7.32e-04 | ] |
| T [ | 3.02e-02 | 3.87e-02 | 0.00e+00 | 0.00e+00 | 0.00e+00 | -4.72e-04 | -7.35e-04 | -8.39e-04 | -8.58e-04 | -6.62e-04 | 2.10e-03 | 1.02e-03 | -4.89e-04 | ] |
| A [ | 2618 | 2312 | 3 | 802 | 5326 | 51581 | 19457 | 25951 | 24356 | 28802 | 18770 | 17951 | 18039 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 39764 | 3395 | 1 | 283 | 99521 | 15617 | 33002 | 30254 | 27325 | 20908 | 23890 | 48992 | 53910 | ] |
| G [ | 4640 | 6953 | 106164 | 104747 | 661 | 8988 | 33599 | 30176 | 33417 | 28388 | 37824 | 14581 | 16549 | ] |
| T [ | 59153 | 93515 | 7 | 343 | 667 | 29989 | 20118 | 19794 | 21077 | 28077 | 25691 | 24651 | 17676 | ] |
