This page shows detailed deep learning-derived predictions and motifs for CTCF in heart left ventricle using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000796.1 |
| Cell line/tissue: | heart left ventricle |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR355PMV |
| Model: | BPNet |
| A [ | -1.10e-03 | -2.56e-03 | -2.53e-03 | -1.13e-04 | -3.09e-04 | 7.08e-03 | -3.62e-04 | -2.00e-04 | -1.87e-03 | 1.84e-02 | -1.65e-03 | -4.84e-03 | -4.93e-04 | -2.70e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.79e-03 | 5.10e-02 | -9.28e-04 | 9.67e-02 | 1.56e-01 | 4.74e-02 | 6.25e-02 | 1.59e-01 | -2.31e-04 | -2.55e-03 | 1.01e-02 | 6.05e-03 | -3.38e-04 | -2.03e-03 | ] |
| G [ | 2.74e-02 | -9.44e-04 | 8.10e-02 | -3.98e-04 | -5.55e-05 | -3.56e-04 | -8.56e-05 | -5.72e-05 | -3.03e-04 | 1.51e-02 | 5.72e-02 | -6.08e-04 | 1.61e-01 | 8.66e-02 | ] |
| T [ | -2.32e-03 | 9.80e-03 | -2.05e-03 | -8.40e-04 | -5.24e-04 | -3.13e-03 | 1.77e-02 | -3.12e-04 | 8.00e-02 | -5.05e-03 | -2.01e-03 | 2.75e-02 | -5.57e-04 | -1.33e-03 | ] |
| A [ | 2603 | 1298 | 2407 | 2194 | 158 | 11018 | 228 | 78 | 1440 | 10812 | 833 | 3648 | 148 | 1842 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9384 | 15600 | 720 | 26965 | 29978 | 16861 | 18026 | 30133 | 2000 | 2355 | 10485 | 4498 | 146 | 1781 | ] |
| G [ | 15527 | 1198 | 23364 | 737 | 53 | 1114 | 199 | 49 | 855 | 12723 | 17489 | 1241 | 29651 | 24013 | ] |
| T [ | 2941 | 12358 | 3963 | 559 | 266 | 1462 | 12002 | 195 | 26160 | 4566 | 1648 | 21068 | 510 | 2819 | ] |
