This page shows detailed deep learning-derived predictions and motifs for CTCF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000797.1 |
| Cell line/tissue: | K562 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000EGM |
| Model: | BPNet |
| A [ | -1.74e-03 | -1.16e-03 | 1.50e-02 | -1.33e-03 | -3.82e-03 | 5.45e-02 | -4.01e-04 | 1.05e-02 | -4.93e-03 | -9.63e-04 | -1.92e-03 | -3.80e-03 | 3.68e-03 | -2.67e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.63e-02 | 1.33e-01 | 2.15e-04 | 3.96e-02 | 1.06e-02 | -3.68e-04 | -1.21e-04 | -1.82e-04 | -4.10e-04 | -7.90e-05 | 8.09e-04 | 7.02e-02 | 1.54e-05 | 2.98e-02 | ] |
| G [ | -1.91e-03 | -5.91e-04 | 6.10e-03 | 9.84e-03 | -1.82e-03 | 5.71e-04 | 1.42e-01 | 6.81e-02 | 4.63e-02 | 1.35e-01 | 8.76e-02 | -2.88e-04 | 5.01e-02 | 8.06e-03 | ] |
| T [ | -2.37e-03 | -9.20e-04 | -4.94e-03 | -2.15e-03 | 1.44e-02 | -2.11e-03 | -4.52e-04 | -7.32e-04 | 3.52e-03 | -6.98e-04 | -6.64e-04 | -3.08e-03 | -2.98e-03 | -9.17e-04 | ] |
| A [ | 6578 | 38 | 41902 | 4600 | 11299 | 52037 | 741 | 22859 | 6234 | 1247 | 2617 | 11337 | 24229 | 7252 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 50688 | 66075 | 3480 | 34867 | 25649 | 1985 | 168 | 542 | 2816 | 435 | 3457 | 44769 | 5105 | 31833 | ] |
| G [ | 4363 | 2 | 8539 | 24181 | 6440 | 6783 | 64716 | 41778 | 35989 | 63320 | 53923 | 3409 | 32283 | 19097 | ] |
| T [ | 4488 | 1 | 12195 | 2468 | 22727 | 5310 | 491 | 937 | 21077 | 1114 | 6119 | 6601 | 4499 | 7934 | ] |
