This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000798.1 |
| Cell line/tissue: | MCF 10A |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR193SZD |
| Model: | BPNet |
| A [ | -1.87e-03 | -3.68e-03 | -2.67e-03 | -6.20e-05 | -4.69e-04 | 8.37e-03 | -5.45e-04 | -2.59e-04 | -2.25e-03 | 2.11e-02 | -2.21e-03 | -6.00e-03 | -6.95e-04 | -3.06e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.29e-02 | 5.80e-02 | -1.60e-03 | 1.23e-01 | 1.78e-01 | 4.96e-02 | 7.68e-02 | 1.90e-01 | 3.99e-04 | -2.43e-03 | 1.37e-02 | 5.97e-03 | -3.87e-04 | -1.98e-03 | ] |
| G [ | 3.52e-02 | -9.23e-04 | 9.47e-02 | -8.32e-04 | -6.64e-05 | -3.55e-04 | -1.70e-04 | -1.03e-04 | -4.32e-04 | 1.64e-02 | 5.94e-02 | -2.88e-04 | 1.83e-01 | 9.32e-02 | ] |
| T [ | -2.85e-03 | 1.22e-02 | -3.58e-03 | -1.18e-03 | -7.42e-04 | -4.48e-03 | 2.08e-02 | -3.66e-04 | 8.32e-02 | -5.25e-03 | -2.14e-03 | 2.64e-02 | -1.08e-03 | -2.10e-03 | ] |
| A [ | 3951 | 2033 | 3642 | 3143 | 278 | 15307 | 322 | 200 | 2381 | 14859 | 1352 | 5912 | 144 | 2844 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12489 | 20501 | 1129 | 36568 | 40647 | 21994 | 24604 | 40787 | 3207 | 3434 | 14983 | 5254 | 164 | 2713 | ] |
| G [ | 20892 | 1804 | 30630 | 991 | 85 | 1494 | 257 | 82 | 1139 | 16608 | 22379 | 1985 | 40679 | 31732 | ] |
| T [ | 4098 | 17092 | 6029 | 728 | 420 | 2635 | 16247 | 361 | 34702 | 6529 | 2716 | 28279 | 443 | 4141 | ] |
