This page shows detailed deep learning-derived predictions and motifs for CTCF in RWPE2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000800.1 |
| Cell line/tissue: | RWPE2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR856JJB |
| Model: | BPNet |
| A [ | -1.43e-03 | -1.27e-03 | 1.73e-02 | -1.72e-03 | -3.64e-03 | 5.45e-02 | -4.53e-04 | 1.16e-02 | -4.47e-03 | -8.78e-04 | -1.84e-03 | -3.30e-03 | 6.93e-03 | -3.06e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.34e-02 | 1.40e-01 | 8.26e-04 | 4.78e-02 | 1.29e-02 | -7.19e-05 | -5.36e-05 | -1.26e-04 | -1.10e-05 | -1.09e-05 | 1.40e-03 | 7.18e-02 | 7.34e-04 | 2.87e-02 | ] |
| G [ | -1.60e-03 | -4.19e-04 | 5.16e-03 | 1.18e-02 | -1.42e-03 | 1.60e-03 | 1.51e-01 | 6.93e-02 | 4.71e-02 | 1.38e-01 | 9.04e-02 | 2.11e-04 | 4.52e-02 | 9.69e-03 | ] |
| T [ | -2.51e-03 | -9.81e-04 | -4.94e-03 | -2.07e-03 | 1.52e-02 | -2.33e-03 | -3.93e-04 | -8.26e-04 | 5.16e-03 | -6.66e-04 | -5.39e-04 | -2.84e-03 | -3.07e-03 | -7.94e-04 | ] |
| A [ | 5421 | 483 | 37759 | 3515 | 9579 | 45841 | 107 | 21287 | 4524 | 110 | 1403 | 9364 | 22768 | 6562 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 44423 | 56253 | 2343 | 30707 | 22033 | 1662 | 20 | 440 | 2056 | 42 | 2011 | 40291 | 3336 | 26190 | ] |
| G [ | 3379 | 43 | 7061 | 20870 | 5171 | 5143 | 56707 | 34515 | 28500 | 56652 | 48590 | 2028 | 27143 | 17326 | ] |
| T [ | 3678 | 121 | 9738 | 1808 | 20116 | 4254 | 66 | 658 | 21820 | 96 | 4896 | 5217 | 3653 | 6822 | ] |
