This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000806.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR666JEF |
| Model: | BPNet |
| A [ | -1.39e-03 | -2.27e-03 | -2.44e-03 | -7.86e-04 | -2.79e-04 | 5.78e-03 | -2.42e-04 | -1.85e-04 | -1.69e-03 | 1.69e-02 | -1.36e-03 | -4.45e-03 | -4.16e-04 | -2.31e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.13e-02 | 5.13e-02 | -6.72e-04 | 1.02e-01 | 1.52e-01 | 4.47e-02 | 6.00e-02 | 1.51e-01 | 1.25e-04 | -1.75e-03 | 9.05e-03 | 6.80e-03 | -1.50e-04 | -1.03e-03 | ] |
| G [ | 2.86e-02 | -7.21e-04 | 9.20e-02 | -8.53e-05 | -1.87e-05 | 1.69e-04 | 1.84e-05 | -1.43e-05 | -1.15e-04 | 1.40e-02 | 6.16e-02 | -2.72e-04 | 1.56e-01 | 8.21e-02 | ] |
| T [ | -2.50e-03 | 9.97e-03 | -3.02e-03 | -1.01e-03 | -5.10e-04 | -2.23e-03 | 2.06e-02 | -2.72e-04 | 6.79e-02 | -5.24e-03 | -1.47e-03 | 2.52e-02 | -4.96e-04 | -1.68e-03 | ] |
| A [ | 2487 | 1093 | 2166 | 2163 | 219 | 10028 | 224 | 91 | 1291 | 10282 | 811 | 3027 | 113 | 1664 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8530 | 13292 | 797 | 23166 | 26319 | 14825 | 15494 | 26576 | 1855 | 2048 | 8573 | 4122 | 98 | 1498 | ] |
| G [ | 13255 | 1162 | 20457 | 910 | 77 | 944 | 185 | 46 | 851 | 10426 | 16174 | 1044 | 26256 | 21254 | ] |
| T [ | 2642 | 11367 | 3495 | 676 | 300 | 1118 | 11012 | 202 | 22918 | 4159 | 1357 | 18722 | 448 | 2499 | ] |
