This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000808.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR450DXU |
| Model: | BPNet |
| A [ | -1.68e-03 | -9.10e-04 | 2.35e-02 | -1.06e-03 | -3.86e-03 | 7.09e-02 | -3.71e-04 | 8.92e-03 | -3.57e-03 | -1.07e-03 | -1.57e-03 | -1.85e-03 | 4.49e-03 | -1.94e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.86e-02 | 1.48e-01 | 7.17e-05 | 5.12e-02 | 1.20e-02 | -3.93e-04 | -6.25e-05 | -1.36e-04 | -3.28e-04 | -1.46e-04 | 1.01e-03 | 6.02e-02 | 5.55e-04 | 2.00e-02 | ] |
| G [ | -1.66e-03 | -3.73e-04 | 4.07e-03 | 9.30e-03 | -1.87e-03 | 6.13e-04 | 1.49e-01 | 6.98e-02 | 4.87e-02 | 1.29e-01 | 7.90e-02 | 1.05e-04 | 3.81e-02 | 6.11e-03 | ] |
| T [ | -1.93e-03 | -6.00e-04 | -4.81e-03 | -1.55e-03 | 2.03e-02 | -1.68e-03 | -2.67e-04 | -5.45e-04 | 1.23e-03 | -8.02e-04 | -5.92e-04 | -2.35e-03 | -2.50e-03 | -4.04e-04 | ] |
| A [ | 3196 | 114 | 27487 | 2074 | 5467 | 33946 | 2 | 13815 | 2507 | 404 | 1634 | 6383 | 15085 | 4799 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 31346 | 38165 | 1331 | 22484 | 15694 | 630 | 4 | 164 | 1076 | 173 | 2116 | 26282 | 3100 | 17735 | ] |
| G [ | 1732 | 12 | 3904 | 12823 | 2269 | 2057 | 38303 | 23945 | 21961 | 37293 | 31309 | 1855 | 17395 | 11234 | ] |
| T [ | 2036 | 20 | 5590 | 930 | 14881 | 1677 | 2 | 387 | 12767 | 441 | 3252 | 3790 | 2731 | 4544 | ] |