Detailed information of deep learning profile BP000816.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000816.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR819LHG
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.30e-05 9.39e-04 4.38e-05 1.46e-06 8.04e-05 1.26e-02 2.20e-06 4.10e-03 -2.51e-04 8.16e-03 4.16e-05 ]
C [ 5.53e-06 -1.30e-05 -1.22e-05 3.63e-06 -2.09e-05 -1.64e-05 9.64e-03 -4.54e-04 4.39e-03 -5.63e-05 -7.17e-05 ]
G [ -5.69e-05 1.12e-02 -2.47e-05 3.68e-05 -8.37e-06 4.77e-04 2.68e-05 -4.32e-06 -1.54e-04 -9.13e-05 2.65e-03 ]
T [ 1.33e-02 -3.67e-06 1.35e-02 8.49e-03 8.58e-03 -3.84e-05 4.90e-05 1.86e-03 2.49e-03 1.13e-04 -1.28e-04 ]

Frequency matrix

A [ 50 236 65 57 144 1593 125 881 173 1222 477 ]
C [ 8 28 45 77 96 25 1596 232 839 105 267 ]
G [ 18 1664 14 194 341 275 49 49 214 102 866 ]
T [ 1871 19 1823 1619 1366 54 177 785 721 518 337 ]

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000287.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000465.1 FOXA1 ENCSR324RCI liver Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000880.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001033.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages