Detailed information of deep learning profile BP000816.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000816.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR819LHG
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.30e-05 9.39e-04 4.38e-05 1.46e-06 8.04e-05 1.26e-02 2.20e-06 4.10e-03 -2.51e-04 8.16e-03 4.16e-05 ]
C [ 5.53e-06 -1.30e-05 -1.22e-05 3.63e-06 -2.09e-05 -1.64e-05 9.64e-03 -4.54e-04 4.39e-03 -5.63e-05 -7.17e-05 ]
G [ -5.69e-05 1.12e-02 -2.47e-05 3.68e-05 -8.37e-06 4.77e-04 2.68e-05 -4.32e-06 -1.54e-04 -9.13e-05 2.65e-03 ]
T [ 1.33e-02 -3.67e-06 1.35e-02 8.49e-03 8.58e-03 -3.84e-05 4.90e-05 1.86e-03 2.49e-03 1.13e-04 -1.28e-04 ]

Frequency matrix

A [ 50 236 65 57 144 1593 125 881 173 1222 477 ]
C [ 8 28 45 77 96 25 1596 232 839 105 267 ]
G [ 18 1664 14 194 341 275 49 49 214 102 866 ]
T [ 1871 19 1823 1619 1366 54 177 785 721 518 337 ]

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
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