This page shows detailed deep learning-derived predictions and motifs for CTCF in A673 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000817.1 |
| Cell line/tissue: | A673 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR611JJS |
| Model: | BPNet |
| A [ | -1.77e-03 | -1.32e-03 | 2.30e-02 | -1.48e-03 | -4.69e-03 | 7.17e-02 | -4.50e-04 | 1.32e-02 | -5.66e-03 | -1.07e-03 | -2.05e-03 | -3.36e-03 | 7.45e-03 | -3.14e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.87e-02 | 1.67e-01 | 8.23e-04 | 5.37e-02 | 1.42e-02 | -3.30e-04 | -8.50e-05 | -2.05e-04 | -3.41e-04 | -8.76e-05 | 1.23e-03 | 8.38e-02 | 5.56e-04 | 3.45e-02 | ] |
| G [ | -1.88e-03 | -4.97e-04 | 5.67e-03 | 1.30e-02 | -2.08e-03 | 1.42e-03 | 1.79e-01 | 8.64e-02 | 5.83e-02 | 1.65e-01 | 1.12e-01 | -7.87e-06 | 5.81e-02 | 9.89e-03 | ] |
| T [ | -2.95e-03 | -1.02e-03 | -5.18e-03 | -2.40e-03 | 1.98e-02 | -2.69e-03 | -4.19e-04 | -7.51e-04 | 4.02e-03 | -8.99e-04 | -8.96e-04 | -3.51e-03 | -3.85e-03 | -8.59e-04 | ] |
| A [ | 5358 | 80 | 37799 | 3578 | 9178 | 45388 | 421 | 20124 | 4344 | 728 | 1864 | 9360 | 22003 | 6188 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 43003 | 55412 | 2471 | 30308 | 20973 | 1326 | 43 | 310 | 1707 | 150 | 2887 | 38415 | 3759 | 26543 | ] |
| G [ | 3386 | 8 | 5898 | 19627 | 4603 | 4853 | 54851 | 34584 | 30740 | 54080 | 46164 | 2333 | 26111 | 16145 | ] |
| T [ | 3776 | 23 | 9355 | 2009 | 20769 | 3955 | 208 | 505 | 18732 | 565 | 4608 | 5415 | 3650 | 6646 | ] |
