Detailed information of deep learning profile BP000819.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP000819.1
Cell line/tissue: GM12878
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR000DZO
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.56e-03 -1.50e-03 -3.18e-04 -3.47e-04 1.57e-02 -2.26e-04 1.36e-05 -7.50e-06 0.00e+00 -2.12e-05 2.35e-02 ]
C [ -5.15e-04 6.00e-02 -3.41e-04 6.86e-02 -4.69e-03 1.96e-03 -9.84e-06 1.34e-01 0.00e+00 9.42e-02 -2.65e-03 ]
G [ 5.29e-02 -1.40e-03 7.81e-02 -8.21e-04 8.88e-04 -4.30e-04 1.11e-01 -6.83e-06 1.24e-01 -2.08e-05 5.71e-03 ]
T [ -2.22e-04 7.11e-06 -4.79e-04 -2.16e-04 -1.72e-03 6.15e-02 -6.81e-06 -6.25e-06 -4.87e-05 7.83e-04 -1.63e-03 ]

Frequency matrix

A [ 2653 2692 2104 1604 4735 608 348 5 4 77 7534 ]
C [ 3082 10368 2169 10961 7456 3305 244 17829 0 16490 3154 ]
G [ 10534 3309 12014 3523 3578 2171 17180 2 17833 253 5895 ]
T [ 1587 1487 1569 1768 2087 11772 84 20 19 1036 1273 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000443.1 NRF1 ENCSR135ANT MCF-7 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
BP001198.1 NRF1 ENCSR000EHZ SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages