This page shows detailed deep learning-derived predictions and motifs for CTCF in keratinocyte using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000820.1 |
| Cell line/tissue: | keratinocyte |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 MA1929.1 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DNC |
| Model: | BPNet |
| A [ | -2.95e-03 | -1.88e-03 | 2.23e-02 | -2.61e-03 | -5.61e-03 | 6.27e-02 | -8.15e-04 | 1.37e-02 | -7.53e-03 | -1.40e-03 | -2.30e-03 | -6.34e-03 | 7.40e-03 | -4.17e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.87e-02 | 1.89e-01 | 1.11e-03 | 5.97e-02 | 2.02e-02 | -2.33e-04 | -1.49e-04 | -3.12e-04 | 8.93e-05 | -8.02e-06 | 6.01e-04 | 1.14e-01 | -1.09e-04 | 4.69e-02 | ] |
| G [ | -1.78e-03 | -7.22e-04 | 7.73e-03 | 1.81e-02 | -1.53e-03 | 2.55e-03 | 2.06e-01 | 9.50e-02 | 6.12e-02 | 1.99e-01 | 1.37e-01 | -8.08e-04 | 7.41e-02 | 1.62e-02 | ] |
| T [ | -3.75e-03 | -1.57e-03 | -8.13e-03 | -3.00e-03 | 1.46e-02 | -2.98e-03 | -6.91e-04 | -1.03e-03 | 4.24e-03 | -8.53e-04 | -9.50e-04 | -3.18e-03 | -4.68e-03 | -1.88e-03 | ] |
| A [ | 6417 | 2657 | 34416 | 4725 | 9879 | 44779 | 751 | 18894 | 5647 | 962 | 1483 | 9308 | 21052 | 5495 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 43360 | 55229 | 4265 | 28985 | 24420 | 2560 | 311 | 632 | 3197 | 309 | 2228 | 43123 | 3282 | 31291 | ] |
| G [ | 5885 | 1248 | 10773 | 23780 | 7556 | 7196 | 58431 | 39839 | 32101 | 57925 | 53029 | 2382 | 32545 | 17024 | ] |
| T [ | 4383 | 912 | 10590 | 2555 | 18190 | 5509 | 552 | 680 | 19099 | 849 | 3305 | 5233 | 3167 | 6235 | ] |
