Detailed information of deep learning profile BP000823.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000823.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BJK
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.19e-02 -1.76e-04 -1.01e-04 1.70e-05 -3.78e-07 2.64e-05 -5.62e-05 -3.94e-04 ]
C [ -2.76e-04 2.95e-02 1.44e-05 1.34e-05 8.79e-02 1.08e-01 2.31e-05 9.66e-04 ]
G [ 2.11e-03 6.54e-04 2.21e-04 1.01e-04 2.93e-05 1.19e-05 6.47e-02 2.88e-02 ]
T [ -1.88e-03 8.87e-04 5.55e-02 8.49e-02 -7.71e-06 -9.78e-07 -3.88e-04 3.37e-05 ]

Frequency matrix

A [ 12005 1508 2409 710 207 5 441 1780 ]
C [ 6452 19236 1356 1383 32207 33093 2046 9051 ]
G [ 10185 5634 2071 813 379 34 22811 18248 ]
T [ 4494 6758 27299 30230 343 4 7838 4057 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000852.1 GABPA ENCSR290MUH K562 Homo sapiens
BP001058.1 GABPA ENCSR000BHS HeLa-S3 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages