Detailed information of deep learning profile BP000823.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000823.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BJK
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.19e-02 -1.76e-04 -1.01e-04 1.70e-05 -3.78e-07 2.64e-05 -5.62e-05 -3.94e-04 ]
C [ -2.76e-04 2.95e-02 1.44e-05 1.34e-05 8.79e-02 1.08e-01 2.31e-05 9.66e-04 ]
G [ 2.11e-03 6.54e-04 2.21e-04 1.01e-04 2.93e-05 1.19e-05 6.47e-02 2.88e-02 ]
T [ -1.88e-03 8.87e-04 5.55e-02 8.49e-02 -7.71e-06 -9.78e-07 -3.88e-04 3.37e-05 ]

Frequency matrix

A [ 12005 1508 2409 710 207 5 441 1780 ]
C [ 6452 19236 1356 1383 32207 33093 2046 9051 ]
G [ 10185 5634 2071 813 379 34 22811 18248 ]
T [ 4494 6758 27299 30230 343 4 7838 4057 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
Showing 10 profiles of page 1 from 2 pages