Detailed information of deep learning profile BP000823.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000823.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BJK
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.37e-05 -3.88e-04 -9.78e-07 -7.71e-06 8.49e-02 5.55e-02 8.87e-04 -1.88e-03 ]
C [ 2.88e-02 6.47e-02 1.19e-05 2.93e-05 1.01e-04 2.21e-04 6.54e-04 2.11e-03 ]
G [ 9.66e-04 2.31e-05 1.08e-01 8.79e-02 1.34e-05 1.44e-05 2.95e-02 -2.76e-04 ]
T [ -3.94e-04 -5.62e-05 2.64e-05 -3.78e-07 1.70e-05 -1.01e-04 -1.76e-04 2.19e-02 ]

Frequency matrix

A [ 4057 7838 4 343 30230 27299 6758 4494 ]
C [ 18248 22811 34 379 813 2071 5634 10185 ]
G [ 9051 2046 33093 32207 1383 1356 19236 6452 ]
T [ 1780 441 5 207 710 2409 1508 12005 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
Showing 10 profiles of page 1 from 2 pages