This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000825.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AUE |
| Model: | BPNet |
| A [ | -1.30e-03 | -4.38e-03 | -3.62e-03 | -3.41e-04 | -8.07e-04 | 7.75e-03 | -7.60e-04 | -4.04e-04 | -3.06e-03 | 2.35e-02 | -2.76e-03 | -6.26e-03 | -1.25e-03 | -3.50e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.18e-02 | 7.67e-02 | -1.46e-03 | 1.43e-01 | 2.05e-01 | 6.73e-02 | 9.27e-02 | 2.15e-01 | 8.40e-04 | -2.45e-03 | 1.49e-02 | 6.75e-03 | -8.14e-04 | -2.57e-03 | ] |
| G [ | 4.60e-02 | -1.29e-03 | 1.20e-01 | -5.66e-04 | -5.57e-05 | -6.39e-04 | -2.73e-04 | -1.23e-04 | -4.12e-04 | 1.73e-02 | 6.38e-02 | 9.67e-05 | 1.96e-01 | 1.03e-01 | ] |
| T [ | -3.66e-03 | 9.06e-03 | -4.78e-03 | -1.64e-03 | -9.54e-04 | -6.12e-03 | 1.82e-02 | -5.21e-04 | 8.82e-02 | -6.51e-03 | -2.40e-03 | 2.88e-02 | -1.60e-03 | -2.37e-03 | ] |
| A [ | 4478 | 2340 | 3792 | 3184 | 371 | 17502 | 372 | 258 | 3222 | 16527 | 1769 | 7484 | 407 | 3505 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13335 | 24431 | 1048 | 42789 | 46373 | 25040 | 29421 | 46549 | 3924 | 4354 | 17853 | 6103 | 517 | 3542 | ] |
| G [ | 25005 | 2009 | 36091 | 700 | 77 | 1551 | 260 | 91 | 1238 | 18861 | 24151 | 2663 | 45471 | 35272 | ] |
| T [ | 4524 | 18560 | 6410 | 668 | 520 | 3248 | 17288 | 443 | 38956 | 7599 | 3568 | 31092 | 946 | 5022 | ] |
