This page shows detailed deep learning-derived predictions and motifs for CTCF in sigmoid colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000836.1 |
| Cell line/tissue: | sigmoid colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR857RJQ |
| Model: | BPNet |
| A [ | -1.42e-03 | -2.95e-03 | -2.85e-03 | -3.91e-04 | -5.41e-04 | 6.33e-03 | -4.20e-04 | -2.11e-04 | -1.78e-03 | 1.80e-02 | -1.51e-03 | -4.78e-03 | -4.32e-04 | -2.74e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.18e-02 | 5.00e-02 | -3.55e-04 | 1.05e-01 | 1.56e-01 | 4.78e-02 | 6.42e-02 | 1.69e-01 | 5.58e-04 | -2.30e-03 | 1.22e-02 | 7.42e-03 | -2.47e-04 | -1.55e-03 | ] |
| G [ | 2.90e-02 | -1.65e-04 | 8.41e-02 | 4.27e-04 | -8.87e-05 | -3.03e-05 | -1.75e-05 | -3.11e-05 | -2.21e-04 | 1.72e-02 | 6.33e-02 | -8.73e-04 | 1.72e-01 | 8.97e-02 | ] |
| T [ | -2.48e-03 | 9.61e-03 | -2.09e-03 | -1.37e-03 | -6.63e-04 | -3.03e-03 | 2.01e-02 | -3.22e-04 | 7.65e-02 | -4.81e-03 | -1.72e-03 | 3.18e-02 | -6.91e-04 | -1.75e-03 | ] |
| A [ | 2463 | 1323 | 2278 | 2182 | 66 | 10532 | 203 | 68 | 1278 | 10420 | 717 | 3385 | 102 | 1741 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9304 | 14211 | 711 | 25439 | 28683 | 15943 | 16564 | 28667 | 1767 | 2122 | 9764 | 4113 | 84 | 1593 | ] |
| G [ | 14262 | 1224 | 21952 | 705 | 15 | 988 | 191 | 29 | 725 | 11993 | 17031 | 979 | 28384 | 22965 | ] |
| T [ | 2866 | 12137 | 3954 | 569 | 131 | 1432 | 11937 | 131 | 25125 | 4360 | 1383 | 20418 | 325 | 2596 | ] |
