Detailed information of deep learning profile BP000837.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000837.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR287FWE
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.84e-03 -5.60e-05 6.21e-03 5.70e-02 4.85e-06 2.88e-02 -8.01e-04 1.62e-03 1.62e-03 -2.91e-03 1.19e-04 -5.27e-04 1.67e-03 -5.62e-04 -1.88e-03 ]
C [ -3.68e-05 -1.04e-06 -1.19e-03 0.00e+00 8.01e-02 -1.78e-04 2.09e-04 -1.28e-03 2.27e-03 2.60e-03 -6.27e-05 -3.02e-04 -1.26e-03 4.50e-02 4.17e-03 ]
G [ 6.08e-03 6.19e-02 -6.99e-04 -5.80e-06 -5.71e-06 9.15e-04 3.13e-04 -1.36e-03 4.24e-04 -1.28e-03 7.40e-02 -4.21e-04 -1.14e-03 -1.61e-04 -9.67e-06 ]
T [ -1.11e-03 -5.85e-05 1.64e-03 -2.40e-05 3.72e-05 -5.02e-04 5.19e-03 3.35e-03 -9.20e-04 1.61e-02 2.14e-05 4.46e-02 2.90e-03 -9.37e-04 5.78e-03 ]

Frequency matrix

A [ 4237 280 3847 8414 12 6958 1658 2711 2438 1985 54 1207 2234 1452 1663 ]
C [ 125 21 1176 34 8779 195 2194 1753 2489 559 26 563 1939 5477 2853 ]
G [ 2870 8340 1708 57 6 442 2299 1638 2151 620 8729 464 1488 313 563 ]
T [ 1595 186 2097 322 30 1232 2676 2726 1749 5663 18 6594 3165 1585 3748 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages