Detailed information of deep learning profile BP000837.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000837.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR287FWE
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.78e-03 -9.37e-04 2.90e-03 4.46e-02 2.14e-05 1.61e-02 -9.20e-04 3.35e-03 5.19e-03 -5.02e-04 3.72e-05 -2.40e-05 1.64e-03 -5.85e-05 -1.11e-03 ]
C [ -9.67e-06 -1.61e-04 -1.14e-03 -4.21e-04 7.40e-02 -1.28e-03 4.24e-04 -1.36e-03 3.13e-04 9.15e-04 -5.71e-06 -5.80e-06 -6.99e-04 6.19e-02 6.08e-03 ]
G [ 4.17e-03 4.50e-02 -1.26e-03 -3.02e-04 -6.27e-05 2.60e-03 2.27e-03 -1.28e-03 2.09e-04 -1.78e-04 8.01e-02 0.00e+00 -1.19e-03 -1.04e-06 -3.68e-05 ]
T [ -1.88e-03 -5.62e-04 1.67e-03 -5.27e-04 1.19e-04 -2.91e-03 1.62e-03 1.62e-03 -8.01e-04 2.88e-02 4.85e-06 5.70e-02 6.21e-03 -5.60e-05 7.84e-03 ]

Frequency matrix

A [ 3748 1585 3165 6594 18 5663 1749 2726 2676 1232 30 322 2097 186 1595 ]
C [ 563 313 1488 464 8729 620 2151 1638 2299 442 6 57 1708 8340 2870 ]
G [ 2853 5477 1939 563 26 559 2489 1753 2194 195 8779 34 1176 21 125 ]
T [ 1663 1452 2234 1207 54 1985 2438 2711 1658 6958 12 8414 3847 280 4237 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages