This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000838.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR059KXR |
| Model: | BPNet |
| A [ | -9.46e-04 | -3.63e-03 | -3.33e-03 | -5.71e-04 | -5.17e-04 | 5.81e-03 | -5.78e-04 | -3.14e-04 | -2.75e-03 | 2.01e-02 | -2.45e-03 | -6.46e-03 | -5.09e-04 | -3.15e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.18e-02 | 5.54e-02 | -3.81e-04 | 1.12e-01 | 1.73e-01 | 5.77e-02 | 7.07e-02 | 1.79e-01 | 7.59e-04 | -2.10e-03 | 1.32e-02 | 6.41e-03 | -3.42e-04 | -1.95e-03 | ] |
| G [ | 3.18e-02 | -6.22e-04 | 8.83e-02 | 6.31e-04 | -1.51e-05 | 1.53e-04 | 1.61e-05 | -3.10e-05 | -1.37e-04 | 1.55e-02 | 6.19e-02 | -4.11e-04 | 1.81e-01 | 9.48e-02 | ] |
| T [ | -2.96e-03 | 8.96e-03 | -3.25e-03 | -1.62e-03 | -7.55e-04 | -4.18e-03 | 1.58e-02 | -4.01e-04 | 7.44e-02 | -5.51e-03 | -1.88e-03 | 2.60e-02 | -5.91e-04 | -1.81e-03 | ] |
| A [ | 5064 | 2671 | 4122 | 3869 | 406 | 15730 | 693 | 229 | 3112 | 17027 | 1538 | 6586 | 4 | 3121 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14353 | 22244 | 1933 | 38477 | 45000 | 25487 | 27148 | 45442 | 3980 | 4048 | 15988 | 6603 | 4 | 3070 | ] |
| G [ | 21935 | 2838 | 32973 | 2344 | 174 | 2117 | 708 | 78 | 1680 | 17760 | 25801 | 2273 | 46139 | 35581 | ] |
| T [ | 4802 | 18402 | 7128 | 1465 | 575 | 2821 | 17607 | 406 | 37383 | 7319 | 2828 | 30693 | 8 | 4383 | ] |
