This page shows detailed deep learning-derived predictions and motifs for CTCF in cardiac fibroblast using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000839.1 |
| Cell line/tissue: | cardiac fibroblast |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DTF |
| Model: | BPNet |
| A [ | -2.17e-03 | -1.53e-03 | 3.04e-02 | -1.92e-03 | -5.66e-03 | 9.28e-02 | -5.34e-04 | 1.49e-02 | -6.04e-03 | -1.46e-03 | -2.51e-03 | -3.77e-03 | 6.68e-03 | -3.76e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.14e-01 | 2.03e-01 | -2.14e-04 | 6.75e-02 | 1.80e-02 | -4.71e-04 | -8.47e-05 | -3.14e-04 | -1.46e-04 | -8.15e-05 | 1.92e-03 | 8.27e-02 | 1.07e-03 | 3.05e-02 | ] |
| G [ | -2.03e-03 | -5.66e-04 | 7.85e-03 | 1.62e-02 | -2.54e-03 | 1.67e-03 | 2.13e-01 | 9.21e-02 | 6.71e-02 | 1.78e-01 | 1.10e-01 | 5.46e-04 | 5.22e-02 | 9.98e-03 | ] |
| T [ | -3.37e-03 | -7.99e-04 | -6.70e-03 | -2.66e-03 | 2.55e-02 | -2.88e-03 | -4.42e-04 | -8.93e-04 | 1.83e-03 | -1.26e-03 | -1.69e-03 | -3.59e-03 | -4.33e-03 | -7.61e-04 | ] |
| A [ | 4982 | 1264 | 35325 | 3538 | 8347 | 45231 | 145 | 19081 | 4426 | 1033 | 2710 | 9664 | 20059 | 6659 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 42663 | 52368 | 2804 | 30075 | 21923 | 1313 | 23 | 544 | 2211 | 754 | 3956 | 35716 | 4912 | 25073 | ] |
| G [ | 3317 | 305 | 7574 | 18863 | 4226 | 4439 | 53990 | 33846 | 31327 | 51313 | 42879 | 3448 | 25236 | 15700 | ] |
| T [ | 3274 | 299 | 8533 | 1761 | 19739 | 3252 | 78 | 765 | 16272 | 1136 | 4691 | 5408 | 4028 | 6804 | ] |