Detailed information of deep learning profile BP000840.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000840.1
Cell line/tissue: liver
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR038GMB
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.09e-02 -3.17e-05 2.77e-04 -2.88e-07 2.06e-05 3.59e-07 -6.18e-05 -2.44e-04 ]
C [ -7.68e-04 2.28e-02 -3.52e-05 1.78e-05 7.42e-02 8.96e-02 -3.64e-05 2.61e-04 ]
G [ 2.40e-03 -3.99e-05 3.97e-05 3.59e-05 2.33e-05 2.51e-05 5.43e-02 2.74e-02 ]
T [ -9.20e-04 2.18e-03 4.86e-02 7.19e-02 -2.63e-06 -7.96e-06 6.30e-04 -1.07e-04 ]

Frequency matrix

A [ 22777 4350 4961 958 1550 28 1663 3500 ]
C [ 10784 29561 2621 2709 53540 58144 2681 13003 ]
G [ 16161 9097 2978 1763 1828 42 37156 34571 ]
T [ 8550 15264 47712 52843 1354 58 16771 7199 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000852.1 GABPA ENCSR290MUH K562 Homo sapiens
BP001058.1 GABPA ENCSR000BHS HeLa-S3 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages