Detailed information of deep learning profile BP000844.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP000844.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BIU
Model: BPNet

Contribution weight matrix (CWM)

A [ 6.58e-03 -1.19e-03 -3.21e-06 1.14e-01 5.51e-06 1.44e-02 -4.59e-04 -1.06e-06 2.34e-02 -2.25e-03 ]
C [ -4.80e-04 1.95e-03 1.78e-01 -7.63e-05 1.28e-01 1.74e-03 -6.73e-06 1.73e-06 -4.58e-04 3.63e-02 ]
G [ 5.13e-02 -3.71e-04 9.15e-06 1.29e-05 1.76e-03 3.45e-02 -2.55e-04 1.77e-01 4.54e-03 2.67e-04 ]
T [ -1.04e-03 4.71e-02 -2.45e-06 -4.56e-05 3.80e-05 -6.54e-05 1.03e-01 -1.30e-05 -2.69e-03 5.39e-03 ]

Frequency matrix

A [ 16224 4610 126 62015 77 24055 2003 18 26978 4887 ]
C [ 8322 15138 64844 1021 58155 10552 1317 14 10870 31816 ]
G [ 36969 8783 16 1031 5051 30037 1439 64686 20551 10743 ]
T [ 3481 36465 10 929 1712 352 60236 278 6598 17550 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000253.1 USF1 ENCSR000BGI GM12878 Homo sapiens
BP000381.1 USF1 ENCSR000BTZ SK-N-SH Homo sapiens
BP000422.1 USF1 ENCSR099FCQ HepG2 Homo sapiens
BP000512.1 USF1 ENCSR000BPV A549 Homo sapiens
BP000514.1 USF1 ENCSR000BSX Ishikawa Homo sapiens
BP000934.1 USF1 ENCSR000BMF SK-N-SH Homo sapiens
BP000968.1 USF1 ENCSR000BJB A549 Homo sapiens
BP000990.1 USF1 ENCSR000BVK HCT116 Homo sapiens
BP001010.1 USF1 ENCSR000BHX A549 Homo sapiens
BP001029.1 USF1 ENCSR000BGM HepG2 Homo sapiens
Showing 10 profiles of page 1 from 2 pages