Detailed information of deep learning profile BP000844.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP000844.1
Cell line/tissue: H1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BIU
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.39e-03 -2.69e-03 -1.30e-05 1.03e-01 -6.54e-05 3.80e-05 -4.56e-05 -2.45e-06 4.71e-02 -1.04e-03 ]
C [ 2.67e-04 4.54e-03 1.77e-01 -2.55e-04 3.45e-02 1.76e-03 1.29e-05 9.15e-06 -3.71e-04 5.13e-02 ]
G [ 3.63e-02 -4.58e-04 1.73e-06 -6.73e-06 1.74e-03 1.28e-01 -7.63e-05 1.78e-01 1.95e-03 -4.80e-04 ]
T [ -2.25e-03 2.34e-02 -1.06e-06 -4.59e-04 1.44e-02 5.51e-06 1.14e-01 -3.21e-06 -1.19e-03 6.58e-03 ]

Frequency matrix

A [ 17550 6598 278 60236 352 1712 929 10 36465 3481 ]
C [ 10743 20551 64686 1439 30037 5051 1031 16 8783 36969 ]
G [ 31816 10870 14 1317 10552 58155 1021 64844 15138 8322 ]
T [ 4887 26978 18 2003 24055 77 62015 126 4610 16224 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000253.1 USF1 ENCSR000BGI GM12878 Homo sapiens
BP000381.1 USF1 ENCSR000BTZ SK-N-SH Homo sapiens
BP000422.1 USF1 ENCSR099FCQ HepG2 Homo sapiens
BP000512.1 USF1 ENCSR000BPV A549 Homo sapiens
BP000514.1 USF1 ENCSR000BSX Ishikawa Homo sapiens
BP000934.1 USF1 ENCSR000BMF SK-N-SH Homo sapiens
BP000968.1 USF1 ENCSR000BJB A549 Homo sapiens
BP000990.1 USF1 ENCSR000BVK HCT116 Homo sapiens
BP001010.1 USF1 ENCSR000BHX A549 Homo sapiens
BP001029.1 USF1 ENCSR000BGM HepG2 Homo sapiens
Showing 10 profiles of page 1 from 2 pages