This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000846.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR876UZD |
| Model: | BPNet |
| A [ | -1.41e-03 | -1.20e-03 | 1.82e-02 | -1.49e-03 | -3.30e-03 | 5.61e-02 | -3.18e-04 | 1.29e-02 | -3.92e-03 | -5.56e-04 | -1.40e-03 | -2.51e-03 | 7.70e-03 | -2.27e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.27e-02 | 1.25e-01 | 4.87e-05 | 4.18e-02 | 1.05e-02 | -2.24e-04 | -8.33e-05 | -1.50e-04 | -1.82e-04 | -2.48e-05 | 7.75e-04 | 7.29e-02 | 1.15e-04 | 2.82e-02 | ] |
| G [ | -1.52e-03 | -5.21e-04 | 4.95e-03 | 1.04e-02 | -1.62e-03 | 7.40e-04 | 1.38e-01 | 5.66e-02 | 4.26e-02 | 1.31e-01 | 8.28e-02 | -1.13e-04 | 4.62e-02 | 8.14e-03 | ] |
| T [ | -2.15e-03 | -7.51e-04 | -4.51e-03 | -1.77e-03 | 1.57e-02 | -1.77e-03 | -2.87e-04 | -5.00e-04 | 5.74e-03 | -4.63e-04 | -2.04e-04 | -2.50e-03 | -2.88e-03 | -8.22e-04 | ] |
| A [ | 4974 | 5 | 34296 | 3214 | 8156 | 41618 | 33 | 19810 | 3313 | 734 | 1651 | 8059 | 20408 | 5295 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 39198 | 50959 | 2229 | 27750 | 19635 | 1408 | 6 | 404 | 1839 | 159 | 2505 | 36292 | 3229 | 25038 | ] |
| G [ | 3291 | 3 | 6378 | 18255 | 4517 | 4465 | 50918 | 30162 | 27776 | 49549 | 42340 | 1946 | 24341 | 14946 | ] |
| T [ | 3509 | 6 | 8070 | 1755 | 18665 | 3482 | 16 | 597 | 18045 | 531 | 4477 | 4676 | 2994 | 5693 | ] |