This page shows detailed deep learning-derived predictions and motifs for CTCF in upper lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000850.1 |
| Cell line/tissue: | upper lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR027FSZ |
| Model: | BPNet |
| A [ | -7.74e-04 | -2.28e-03 | -2.25e-03 | -3.66e-04 | -6.57e-04 | 4.26e-03 | -4.68e-04 | -2.35e-04 | -1.88e-03 | 1.62e-02 | -1.51e-03 | -4.66e-03 | -2.91e-04 | -2.53e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.32e-03 | 3.62e-02 | -1.42e-04 | 7.44e-02 | 1.23e-01 | 4.12e-02 | 5.79e-02 | 1.49e-01 | 8.85e-04 | -1.37e-03 | 1.34e-02 | 5.33e-03 | -1.12e-04 | -1.03e-03 | ] |
| G [ | 1.97e-02 | 1.18e-04 | 6.35e-02 | 7.94e-04 | 3.47e-05 | 1.68e-04 | 1.41e-05 | 9.04e-07 | -4.71e-05 | 1.43e-02 | 5.69e-02 | -5.54e-04 | 1.59e-01 | 8.56e-02 | ] |
| T [ | -1.89e-03 | 6.57e-03 | -1.99e-03 | -1.25e-03 | -8.62e-04 | -3.11e-03 | 1.33e-02 | -3.66e-04 | 5.98e-02 | -4.55e-03 | -1.75e-03 | 2.49e-02 | -4.29e-04 | -1.36e-03 | ] |
| A [ | 5981 | 3922 | 5003 | 4545 | 1292 | 14650 | 937 | 184 | 3316 | 16525 | 1366 | 7282 | 0 | 2490 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15662 | 23591 | 4236 | 37859 | 46158 | 27626 | 32807 | 49718 | 5098 | 4839 | 17168 | 9707 | 0 | 3075 | ] |
| G [ | 22472 | 5750 | 33077 | 5093 | 1555 | 4198 | 1042 | 151 | 2300 | 21771 | 29386 | 2399 | 50437 | 40981 | ] |
| T [ | 6323 | 17176 | 8122 | 2942 | 1432 | 3964 | 15652 | 385 | 39725 | 7302 | 2519 | 31049 | 1 | 3891 | ] |
