This page shows detailed deep learning-derived predictions and motifs for CTCF in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000851.1 |
| Cell line/tissue: | Ishikawa |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000BQE |
| Model: | BPNet |
| A [ | -9.72e-04 | -1.67e-03 | -1.88e-03 | -5.93e-05 | -2.03e-04 | 7.17e-03 | -2.05e-04 | -1.42e-04 | -1.35e-03 | 1.35e-02 | -1.11e-03 | -2.81e-03 | -3.30e-04 | -1.22e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.72e-03 | 4.16e-02 | -7.49e-04 | 7.68e-02 | 1.16e-01 | 3.38e-02 | 4.40e-02 | 1.20e-01 | -2.36e-04 | -1.92e-03 | 7.48e-03 | 3.93e-03 | -1.70e-04 | -1.69e-03 | ] |
| G [ | 2.71e-02 | -6.04e-04 | 7.50e-02 | -3.81e-04 | -4.31e-05 | -3.65e-04 | -5.18e-05 | -5.10e-05 | -3.30e-04 | 8.61e-03 | 4.23e-02 | -7.38e-04 | 1.23e-01 | 5.85e-02 | ] |
| T [ | -1.96e-03 | 1.02e-02 | -1.72e-03 | -7.18e-04 | -3.14e-04 | -1.69e-03 | 1.72e-02 | -2.10e-04 | 6.13e-02 | -2.95e-03 | -1.23e-03 | 2.39e-02 | -3.54e-04 | -1.36e-03 | ] |
| A [ | 2074 | 1070 | 2097 | 2014 | 38 | 10244 | 169 | 81 | 1450 | 9626 | 787 | 3224 | 155 | 1834 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8089 | 12997 | 529 | 23244 | 26241 | 14117 | 15354 | 26059 | 1908 | 1974 | 8760 | 3221 | 120 | 1605 | ] |
| G [ | 13784 | 874 | 20548 | 554 | 7 | 722 | 112 | 32 | 642 | 10501 | 15395 | 1018 | 25677 | 20321 | ] |
| T [ | 2408 | 11414 | 3181 | 542 | 69 | 1272 | 10720 | 183 | 22356 | 4253 | 1413 | 18892 | 403 | 2595 | ] |