Detailed information of deep learning profile BP000852.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000852.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR290MUH
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.98e-03 -3.17e-04 2.80e-03 -2.33e-06 -4.97e-06 6.58e-02 4.30e-02 2.00e-03 -8.98e-04 ]
C [ -3.48e-04 2.81e-02 3.98e-02 1.74e-05 2.00e-05 4.61e-05 1.11e-05 1.42e-04 2.40e-03 ]
G [ 2.97e-03 6.66e-04 -8.83e-05 8.85e-02 7.86e-02 1.01e-05 -9.65e-06 2.61e-02 -5.07e-04 ]
T [ -4.19e-04 -2.72e-04 -1.52e-04 2.67e-06 6.79e-06 -1.27e-05 4.96e-04 -8.62e-05 1.90e-02 ]

Frequency matrix

A [ 27630 9236 30615 74 304 71825 62792 16181 9715 ]
C [ 14922 43843 37386 53 227 922 2850 9477 21699 ]
G [ 24886 18500 5197 74808 74268 1454 2991 47309 11828 ]
T [ 7511 3371 1751 15 151 749 6317 1983 31707 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
BP001058.1 GABPA ENCSR000BHS HeLa-S3 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages