Detailed information of deep learning profile BP000852.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000852.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR290MUH
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.90e-02 -8.62e-05 4.96e-04 -1.27e-05 6.79e-06 2.67e-06 -1.52e-04 -2.72e-04 -4.19e-04 ]
C [ -5.07e-04 2.61e-02 -9.65e-06 1.01e-05 7.86e-02 8.85e-02 -8.83e-05 6.66e-04 2.97e-03 ]
G [ 2.40e-03 1.42e-04 1.11e-05 4.61e-05 2.00e-05 1.74e-05 3.98e-02 2.81e-02 -3.48e-04 ]
T [ -8.98e-04 2.00e-03 4.30e-02 6.58e-02 -4.97e-06 -2.33e-06 2.80e-03 -3.17e-04 7.98e-03 ]

Frequency matrix

A [ 31707 1983 6317 749 151 15 1751 3371 7511 ]
C [ 11828 47309 2991 1454 74268 74808 5197 18500 24886 ]
G [ 21699 9477 2850 922 227 53 37386 43843 14922 ]
T [ 9715 16181 62792 71825 304 74 30615 9236 27630 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
Showing 10 profiles of page 1 from 2 pages