Detailed information of deep learning profile BP000852.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000852.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR290MUH
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.98e-03 -3.17e-04 2.80e-03 -2.33e-06 -4.97e-06 6.58e-02 4.30e-02 2.00e-03 -8.98e-04 ]
C [ -3.48e-04 2.81e-02 3.98e-02 1.74e-05 2.00e-05 4.61e-05 1.11e-05 1.42e-04 2.40e-03 ]
G [ 2.97e-03 6.66e-04 -8.83e-05 8.85e-02 7.86e-02 1.01e-05 -9.65e-06 2.61e-02 -5.07e-04 ]
T [ -4.19e-04 -2.72e-04 -1.52e-04 2.67e-06 6.79e-06 -1.27e-05 4.96e-04 -8.62e-05 1.90e-02 ]

Frequency matrix

A [ 27630 9236 30615 74 304 71825 62792 16181 9715 ]
C [ 14922 43843 37386 53 227 922 2850 9477 21699 ]
G [ 24886 18500 5197 74808 74268 1454 2991 47309 11828 ]
T [ 7511 3371 1751 15 151 749 6317 1983 31707 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
Showing 10 profiles of page 1 from 2 pages