Detailed information of deep learning profile BP000853.1

This page shows detailed deep learning-derived predictions and motifs for STAT1 in K562 using a single trained BPNet model.

Model details

Name: STAT1
Model ID: BP000853.1
Cell line/tissue: K562
Class: STAT domain factors
Family: STAT factors
Best Match(es): MA0137.2 MA0137.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q53XW4  
Source: ENCSR000FAV
Model: BPNet

Contribution weight matrix (CWM)

A [ 6.11e-03 -1.44e-03 1.59e-05 2.24e-04 3.31e-04 -6.71e-04 -2.80e-03 1.30e-03 1.95e-04 3.71e-02 4.49e-02 5.85e-03 -1.11e-03 -5.65e-04 ]
C [ -7.46e-04 1.32e-03 -9.01e-05 -2.01e-04 2.54e-02 1.68e-02 3.68e-03 -6.33e-05 -1.86e-04 -7.89e-06 -3.56e-05 -1.46e-03 1.96e-03 1.43e-03 ]
G [ 2.56e-03 -5.84e-04 -4.00e-05 -2.11e-04 -1.06e-04 -1.60e-04 4.28e-03 2.38e-02 1.62e-02 -2.90e-05 -5.76e-06 3.22e-03 -1.90e-03 7.40e-03 ]
T [ -1.48e-03 1.27e-02 3.63e-02 3.02e-02 -1.80e-05 1.32e-03 -2.71e-03 -1.73e-04 9.23e-04 -3.77e-06 -5.09e-05 -1.08e-03 7.66e-03 -5.24e-04 ]

Frequency matrix

A [ 549 126 32 61 121 66 369 239 150 1353 1383 544 173 223 ]
C [ 239 358 21 64 1166 867 289 28 36 16 0 271 366 354 ]
G [ 355 192 23 47 30 69 451 1094 1042 6 1 401 220 602 ]
T [ 243 710 1310 1214 69 384 277 25 158 11 2 170 627 207 ]