Detailed information of deep learning profile BP000853.1

This page shows detailed deep learning-derived predictions and motifs for STAT1 in K562 using a single trained BPNet model.

Model details

Name: STAT1
Model ID: BP000853.1
Cell line/tissue: K562
Class: STAT domain factors
Family: STAT factors
Best Match(es): MA0137.2 MA0137.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q53XW4  
Source: ENCSR000FAV
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.24e-04 7.66e-03 -1.08e-03 -5.09e-05 -3.77e-06 9.23e-04 -1.73e-04 -2.71e-03 1.32e-03 -1.80e-05 3.02e-02 3.63e-02 1.27e-02 -1.48e-03 ]
C [ 7.40e-03 -1.90e-03 3.22e-03 -5.76e-06 -2.90e-05 1.62e-02 2.38e-02 4.28e-03 -1.60e-04 -1.06e-04 -2.11e-04 -4.00e-05 -5.84e-04 2.56e-03 ]
G [ 1.43e-03 1.96e-03 -1.46e-03 -3.56e-05 -7.89e-06 -1.86e-04 -6.33e-05 3.68e-03 1.68e-02 2.54e-02 -2.01e-04 -9.01e-05 1.32e-03 -7.46e-04 ]
T [ -5.65e-04 -1.11e-03 5.85e-03 4.49e-02 3.71e-02 1.95e-04 1.30e-03 -2.80e-03 -6.71e-04 3.31e-04 2.24e-04 1.59e-05 -1.44e-03 6.11e-03 ]

Frequency matrix

A [ 207 627 170 2 11 158 25 277 384 69 1214 1310 710 243 ]
C [ 602 220 401 1 6 1042 1094 451 69 30 47 23 192 355 ]
G [ 354 366 271 0 16 36 28 289 867 1166 64 21 358 239 ]
T [ 223 173 544 1383 1353 150 239 369 66 121 61 32 126 549 ]