Detailed information of deep learning profile BP000854.1

This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000854.1
Cell line/tissue: Ishikawa
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0112.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR000BIY
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.89e-05 -1.74e-04 -3.19e-04 -6.88e-04 1.83e-03 4.63e-04 1.19e-03 3.53e-04 -2.38e-05 -1.32e-06 3.42e-02 -4.72e-06 1.01e-04 -1.60e-04 1.47e-03 ]
C [ 7.61e-04 4.02e-04 9.14e-04 7.01e-03 4.25e-04 4.46e-03 1.65e-03 9.52e-06 9.63e-05 1.96e-05 2.01e-04 4.80e-02 3.72e-02 6.68e-03 -2.94e-04 ]
G [ 7.00e-03 4.72e-03 3.51e-03 4.03e-04 2.67e-03 1.42e-03 2.42e-03 5.34e-03 3.40e-05 4.97e-02 3.47e-05 8.65e-08 3.50e-06 2.07e-05 6.25e-03 ]
T [ -9.08e-04 3.26e-05 4.13e-04 9.62e-04 -3.63e-05 -3.12e-04 -9.31e-04 -2.47e-04 3.87e-02 4.40e-06 1.35e-05 -2.88e-05 -3.89e-05 1.00e-02 -4.88e-04 ]

Frequency matrix

A [ 14671 14803 13137 12034 20432 14908 15097 13270 610 1417 48166 732 10712 6323 15305 ]
C [ 12780 11785 15384 22947 12332 19981 17640 19027 1741 340 11310 61661 47672 18275 13081 ]
G [ 22356 22729 17267 13029 14262 15631 14155 19369 78 61790 2688 573 239 4721 19318 ]
T [ 13916 14406 17935 15713 16697 13204 16831 12057 61293 176 1559 757 5099 34405 16020 ]

Alternative motif patterns (AMPs)

5 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000282.1 ESR1 ENCSR000BQD T47D Homo sapiens
BP000481.1 ESR1 ENCSR000BKN T47D Homo sapiens
BP000896.1 ESR1 ENCSR000BQR Ishikawa Homo sapiens
BP001071.1 ESR1 ENCSR463GOT MCF-7 Homo sapiens
BP001259.1 ESR1 ENCSR000BJS T47D Homo sapiens
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