This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000858.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR094PSL |
| Model: | BPNet |
| A [ | -1.60e-03 | -1.01e-03 | 2.72e-02 | -2.37e-03 | -5.19e-03 | 8.05e-02 | -4.64e-04 | 1.48e-02 | -4.75e-03 | -8.77e-04 | -1.90e-03 | -3.29e-03 | 8.67e-03 | -2.63e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.81e-02 | 1.80e-01 | -9.87e-05 | 6.56e-02 | 1.66e-02 | -2.03e-04 | -5.35e-05 | -6.50e-05 | 1.25e-04 | -6.29e-05 | 1.33e-03 | 8.72e-02 | 2.39e-04 | 2.80e-02 | ] |
| G [ | -2.26e-03 | -4.63e-04 | 7.87e-03 | 1.19e-02 | -2.37e-03 | 1.21e-03 | 1.84e-01 | 7.69e-02 | 5.95e-02 | 1.70e-01 | 1.03e-01 | 1.21e-04 | 5.07e-02 | 1.15e-02 | ] |
| T [ | -2.79e-03 | -7.42e-04 | -6.59e-03 | -1.99e-03 | 2.40e-02 | -2.55e-03 | -3.58e-04 | -6.51e-04 | 5.64e-03 | -8.43e-04 | -4.43e-04 | -3.54e-03 | -3.56e-03 | -8.82e-04 | ] |
| A [ | 4583 | 620 | 32523 | 3146 | 7727 | 40686 | 405 | 18194 | 3304 | 683 | 1896 | 7755 | 19785 | 5387 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 39086 | 49188 | 2503 | 28026 | 19867 | 1760 | 99 | 648 | 2460 | 335 | 2980 | 35422 | 3662 | 23124 | ] |
| G [ | 3247 | 114 | 7764 | 17302 | 4297 | 4343 | 49345 | 30616 | 27924 | 48522 | 41020 | 2492 | 23466 | 15872 | ] |
| T [ | 3168 | 162 | 7293 | 1611 | 18192 | 3295 | 235 | 626 | 16395 | 544 | 4189 | 4415 | 3170 | 5701 | ] |
