This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000859.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR452KYY |
| Model: | BPNet |
| A [ | -1.05e-03 | -2.12e-03 | -2.77e-03 | -6.60e-04 | -3.53e-04 | 6.40e-03 | -2.23e-04 | -1.78e-04 | -1.69e-03 | 1.82e-02 | -1.37e-03 | -3.80e-03 | -3.86e-04 | -2.33e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.14e-02 | 5.24e-02 | -5.30e-04 | 1.01e-01 | 1.48e-01 | 4.90e-02 | 6.21e-02 | 1.56e-01 | 1.97e-04 | -2.19e-03 | 8.19e-03 | 6.60e-03 | -1.75e-04 | -1.34e-03 | ] |
| G [ | 2.54e-02 | -7.16e-04 | 8.66e-02 | -6.19e-05 | -2.15e-05 | -1.07e-04 | -2.56e-05 | -2.04e-05 | -2.32e-04 | 1.42e-02 | 6.57e-02 | -5.05e-04 | 1.62e-01 | 9.06e-02 | ] |
| T [ | -2.25e-03 | 7.71e-03 | -1.69e-03 | -1.01e-03 | -5.24e-04 | -2.20e-03 | 1.63e-02 | -3.11e-04 | 7.49e-02 | -4.95e-03 | -1.25e-03 | 2.86e-02 | -3.51e-04 | -1.71e-03 | ] |
| A [ | 2440 | 1153 | 2209 | 2123 | 257 | 9511 | 266 | 121 | 1180 | 9967 | 691 | 2795 | 141 | 1535 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8054 | 12367 | 795 | 21713 | 24937 | 14232 | 14917 | 25252 | 1687 | 1704 | 7910 | 3527 | 102 | 1275 | ] |
| G [ | 12450 | 1181 | 19036 | 972 | 86 | 798 | 193 | 39 | 672 | 9979 | 15671 | 1040 | 24959 | 20464 | ] |
| T [ | 2667 | 10910 | 3571 | 802 | 331 | 1071 | 10235 | 199 | 22072 | 3961 | 1339 | 18248 | 409 | 2336 | ] |