This page shows detailed deep learning-derived predictions and motifs for CTCF in GM13976 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000865.1 |
| Cell line/tissue: | GM13976 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DKZ |
| Model: | BPNet |
| A [ | -1.02e-03 | -3.17e-03 | -3.46e-03 | -9.53e-04 | -4.43e-04 | 6.82e-03 | -4.96e-04 | -3.43e-04 | -2.31e-03 | 1.94e-02 | -2.02e-03 | -5.25e-03 | -7.83e-04 | -2.88e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.19e-02 | 6.12e-02 | -4.10e-04 | 1.15e-01 | 1.71e-01 | 5.07e-02 | 7.28e-02 | 1.76e-01 | 4.61e-04 | -2.17e-03 | 1.11e-02 | 6.72e-03 | -4.52e-04 | -1.67e-03 | ] |
| G [ | 3.48e-02 | -5.96e-04 | 9.81e-02 | 1.32e-05 | -8.78e-05 | -3.26e-04 | -1.65e-04 | -1.32e-04 | -3.15e-04 | 1.38e-02 | 5.53e-02 | -4.85e-04 | 1.69e-01 | 8.20e-02 | ] |
| T [ | -3.50e-03 | 8.03e-03 | -3.72e-03 | -1.40e-03 | -7.73e-04 | -3.85e-03 | 1.88e-02 | -4.50e-04 | 7.35e-02 | -4.94e-03 | -1.64e-03 | 2.43e-02 | -9.31e-04 | -2.06e-03 | ] |
| A [ | 3621 | 1819 | 3101 | 3075 | 358 | 13353 | 435 | 220 | 2498 | 13735 | 1257 | 5379 | 308 | 2609 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11648 | 19858 | 1292 | 32966 | 37593 | 21338 | 23581 | 37912 | 3275 | 3624 | 13318 | 6453 | 313 | 2804 | ] |
| G [ | 19681 | 1912 | 29047 | 1481 | 142 | 1639 | 352 | 100 | 1387 | 15270 | 21493 | 1953 | 36969 | 29421 | ] |
| T [ | 3628 | 14988 | 5138 | 1056 | 485 | 2248 | 14211 | 346 | 31418 | 5949 | 2510 | 24793 | 989 | 3744 | ] |
