This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000866.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR369RRE |
| Model: | BPNet |
| A [ | -2.11e-03 | -1.16e-03 | 2.78e-02 | -2.19e-03 | -6.08e-03 | 7.60e-02 | -4.61e-04 | 2.04e-02 | -4.94e-03 | -7.99e-04 | -1.58e-03 | -4.48e-03 | 1.13e-02 | -3.91e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.59e-02 | 1.91e-01 | -5.25e-04 | 6.47e-02 | 1.82e-02 | 1.12e-05 | -1.57e-05 | -6.36e-06 | 4.46e-04 | -3.58e-06 | -1.02e-05 | 1.13e-01 | -1.05e-03 | 3.78e-02 | ] |
| G [ | -1.55e-03 | -3.25e-04 | 9.33e-03 | 1.58e-02 | -1.98e-03 | 1.33e-03 | 1.96e-01 | 7.73e-02 | 6.31e-02 | 1.91e-01 | 1.37e-01 | -8.72e-04 | 6.62e-02 | 1.74e-02 | ] |
| T [ | -3.38e-03 | -8.55e-04 | -7.62e-03 | -2.65e-03 | 2.14e-02 | -3.16e-03 | -3.77e-04 | -5.36e-04 | 8.23e-03 | -6.06e-04 | -4.53e-04 | -4.03e-03 | -4.61e-03 | -1.79e-03 | ] |
| A [ | 4331 | 258 | 28602 | 2554 | 6717 | 35142 | 40 | 17677 | 2149 | 493 | 940 | 5781 | 18280 | 4100 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 31896 | 41759 | 1743 | 22900 | 16209 | 1296 | 13 | 532 | 1528 | 88 | 1350 | 31717 | 1973 | 19863 | ] |
| G [ | 2900 | 39 | 5901 | 15222 | 3669 | 3054 | 42045 | 23536 | 23152 | 41254 | 36242 | 1270 | 19647 | 13849 | ] |
| T [ | 2979 | 50 | 5860 | 1430 | 15510 | 2614 | 8 | 361 | 15277 | 271 | 3574 | 3338 | 2207 | 4295 | ] |
