This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000868.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR757DFT |
| Model: | BPNet |
| A [ | -1.63e-03 | -3.75e-03 | -3.79e-03 | -8.51e-04 | -6.41e-04 | 6.91e-03 | -5.31e-04 | -3.21e-04 | -2.74e-03 | 2.29e-02 | -2.27e-03 | -6.48e-03 | -6.39e-04 | -3.20e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.31e-02 | 5.70e-02 | -4.75e-04 | 1.19e-01 | 1.81e-01 | 6.13e-02 | 7.64e-02 | 1.94e-01 | 9.73e-04 | -2.45e-03 | 1.35e-02 | 8.42e-03 | -3.14e-04 | -1.87e-03 | ] |
| G [ | 3.12e-02 | -5.28e-04 | 9.94e-02 | 6.04e-04 | -3.23e-05 | 1.69e-04 | -1.75e-05 | -2.62e-05 | -1.54e-04 | 1.68e-02 | 7.23e-02 | -3.62e-04 | 1.95e-01 | 1.05e-01 | ] |
| T [ | -3.02e-03 | 9.28e-03 | -3.34e-03 | -1.66e-03 | -8.42e-04 | -4.43e-03 | 1.97e-02 | -5.24e-04 | 8.03e-02 | -6.24e-03 | -2.25e-03 | 2.85e-02 | -8.19e-04 | -1.97e-03 | ] |
| A [ | 4214 | 2201 | 3470 | 3351 | 293 | 13833 | 486 | 181 | 2413 | 14779 | 1178 | 5368 | 15 | 2548 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12675 | 19176 | 1505 | 33437 | 39083 | 22250 | 23401 | 39350 | 3123 | 3208 | 13639 | 5261 | 21 | 2495 | ] |
| G [ | 18794 | 2252 | 28908 | 1883 | 107 | 1633 | 436 | 62 | 1226 | 15578 | 22797 | 1827 | 39837 | 31186 | ] |
| T [ | 4228 | 16282 | 6028 | 1240 | 428 | 2195 | 15588 | 318 | 33149 | 6347 | 2297 | 27455 | 38 | 3681 | ] |
