This page shows detailed deep learning-derived predictions and motifs for CTCF in foreskin keratinocyte using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000870.1 |
| Cell line/tissue: | foreskin keratinocyte |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR812FNU |
| Model: | BPNet |
| A [ | -1.00e-03 | -9.53e-04 | 1.80e-02 | -1.51e-03 | -3.31e-03 | 5.57e-02 | -2.59e-04 | 1.00e-02 | -4.16e-03 | -8.54e-04 | -1.46e-03 | -2.72e-03 | 6.51e-03 | -1.79e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.46e-02 | 1.21e-01 | 2.32e-04 | 3.88e-02 | 1.19e-02 | -2.22e-04 | -7.05e-05 | -1.38e-04 | -1.77e-04 | -1.53e-05 | 7.03e-04 | 5.95e-02 | 2.92e-04 | 2.36e-02 | ] |
| G [ | -1.46e-03 | -3.26e-04 | 4.98e-03 | 1.04e-02 | -1.38e-03 | 8.53e-04 | 1.28e-01 | 6.12e-02 | 3.60e-02 | 1.16e-01 | 7.64e-02 | 2.55e-05 | 4.01e-02 | 7.49e-03 | ] |
| T [ | -1.97e-03 | -7.14e-04 | -4.21e-03 | -1.44e-03 | 1.43e-02 | -1.47e-03 | -2.53e-04 | -5.98e-04 | 4.24e-03 | -6.72e-04 | -5.91e-04 | -2.11e-03 | -2.50e-03 | -6.24e-04 | ] |
| A [ | 5345 | 240 | 37837 | 3655 | 9071 | 47110 | 6 | 20472 | 5361 | 1039 | 2579 | 10196 | 21778 | 6690 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 44028 | 56081 | 2265 | 29955 | 22286 | 1195 | 2 | 382 | 2075 | 472 | 3361 | 37203 | 4175 | 26127 | ] |
| G [ | 3371 | 25 | 6623 | 20870 | 4914 | 4433 | 56371 | 34804 | 29704 | 53782 | 45291 | 2947 | 26514 | 16560 | ] |
| T [ | 3638 | 37 | 9659 | 1903 | 20111 | 3645 | 4 | 725 | 19243 | 1090 | 5152 | 6038 | 3916 | 7007 | ] |