This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus squamous epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000872.1 |
| Cell line/tissue: | esophagus squamous epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR756URL |
| Model: | BPNet |
| A [ | -9.29e-04 | -2.41e-03 | -2.61e-03 | -4.70e-05 | -4.10e-04 | 6.54e-03 | -4.12e-04 | -1.84e-04 | -1.71e-03 | 1.84e-02 | -1.62e-03 | -4.17e-03 | -4.87e-04 | -2.16e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.24e-03 | 4.64e-02 | -1.86e-04 | 8.97e-02 | 1.39e-01 | 4.52e-02 | 5.80e-02 | 1.45e-01 | 3.30e-05 | -1.98e-03 | 9.60e-03 | 5.92e-03 | -2.51e-04 | -1.71e-03 | ] |
| G [ | 2.80e-02 | -2.90e-04 | 7.67e-02 | 2.65e-04 | -5.81e-05 | -2.52e-04 | -9.29e-05 | -5.85e-05 | -1.72e-04 | 1.14e-02 | 5.05e-02 | -6.20e-04 | 1.45e-01 | 7.72e-02 | ] |
| T [ | -2.42e-03 | 8.94e-03 | -2.55e-03 | -1.13e-03 | -5.34e-04 | -2.77e-03 | 1.56e-02 | -3.50e-04 | 7.25e-02 | -3.93e-03 | -1.39e-03 | 2.52e-02 | -5.95e-04 | -1.48e-03 | ] |
| A [ | 3372 | 1730 | 2938 | 2718 | 274 | 12316 | 361 | 120 | 1795 | 12574 | 1006 | 4470 | 14 | 2117 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10735 | 17472 | 1230 | 29745 | 34248 | 19333 | 21009 | 34574 | 2462 | 2789 | 11864 | 4807 | 30 | 2158 | ] |
| G [ | 17385 | 1780 | 25795 | 1571 | 114 | 1379 | 307 | 73 | 1103 | 14326 | 20173 | 1564 | 34849 | 27592 | ] |
| T [ | 3517 | 14028 | 5047 | 976 | 374 | 1982 | 13333 | 243 | 29649 | 5321 | 1967 | 24169 | 117 | 3143 | ] |
