This page shows detailed deep learning-derived predictions and motifs for CTCF in KMS-11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000873.1 |
| Cell line/tissue: | KMS-11 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR430YRJ |
| Model: | BPNet |
| A [ | -1.76e-03 | -9.28e-04 | 2.55e-02 | -1.15e-03 | -3.96e-03 | 7.88e-02 | -2.81e-04 | 1.43e-02 | -3.79e-03 | -7.46e-04 | -1.41e-03 | -2.45e-03 | 8.42e-03 | -2.69e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.54e-02 | 1.58e-01 | 1.98e-04 | 5.04e-02 | 1.42e-02 | -2.93e-04 | -5.88e-05 | -1.56e-04 | -3.30e-04 | -7.86e-05 | 9.72e-04 | 8.57e-02 | 8.43e-04 | 3.04e-02 | ] |
| G [ | -1.61e-03 | -3.87e-04 | 5.66e-03 | 1.26e-02 | -2.23e-03 | 5.13e-04 | 1.68e-01 | 7.47e-02 | 5.45e-02 | 1.54e-01 | 1.06e-01 | -1.12e-04 | 5.17e-02 | 9.88e-03 | ] |
| T [ | -2.31e-03 | -7.93e-04 | -4.98e-03 | -1.71e-03 | 2.04e-02 | -1.85e-03 | -1.57e-04 | -4.64e-04 | 6.35e-03 | -4.86e-04 | -4.02e-04 | -2.93e-03 | -3.08e-03 | -3.35e-04 | ] |
| A [ | 4051 | 1066 | 28378 | 2999 | 6524 | 35667 | 341 | 15149 | 2440 | 603 | 1413 | 6487 | 16583 | 4610 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 33092 | 40624 | 2424 | 23846 | 16815 | 1115 | 77 | 288 | 1381 | 268 | 2097 | 30358 | 2929 | 20927 | ] |
| G [ | 2703 | 482 | 5675 | 14358 | 3423 | 3158 | 42029 | 26657 | 24575 | 41160 | 35650 | 2031 | 20620 | 12363 | ] |
| T [ | 2773 | 447 | 6143 | 1416 | 15857 | 2679 | 172 | 525 | 14223 | 588 | 3460 | 3743 | 2488 | 4719 | ] |