Detailed information of deep learning profile BP000875.1

This page shows detailed deep learning-derived predictions and motifs for REST in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000875.1
Cell line/tissue: SK-N-SH
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BOZ
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.93e-04 -1.16e-03 8.77e-03 1.08e-04 -9.99e-06 -8.63e-05 -3.85e-05 -2.08e-04 1.47e-05 -3.86e-05 3.53e-02 1.76e-03 -1.17e-03 ]
C [ 5.33e-05 2.88e-03 1.74e-02 -6.20e-04 1.23e-01 2.35e-04 -3.32e-05 2.54e-04 1.21e-01 1.13e-01 -2.50e-04 2.20e-04 2.96e-02 ]
G [ 3.71e-02 3.38e-02 -6.76e-05 4.99e-02 3.38e-05 2.93e-04 7.75e-02 6.82e-04 1.58e-04 1.37e-04 1.44e-03 2.62e-02 2.06e-03 ]
T [ -1.02e-03 1.37e-04 -3.02e-04 -1.60e-03 3.03e-05 9.57e-02 -3.66e-05 7.32e-02 3.17e-05 -2.63e-05 -3.18e-04 -6.39e-04 -1.02e-03 ]

Frequency matrix

A [ 1400 577 2850 1038 4 45 354 282 3 3 5578 1937 1116 ]
C [ 341 1571 2858 512 7746 9 635 26 7644 7686 648 1106 2339 ]
G [ 5096 4503 208 5081 3 12 6649 463 5 12 744 2919 3173 ]
T [ 958 1144 1879 1164 42 7729 157 7024 143 94 825 1833 1167 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages