This page shows detailed deep learning-derived predictions and motifs for SRF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP000878.1 |
| Cell line/tissue: | HepG2 |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR516SMM |
| Model: | BPNet |
| A [ | 1.08e-05 | 8.11e-06 | 4.57e-03 | 1.73e-04 | 1.85e-02 | 7.26e-05 | 1.31e-02 | 1.59e-03 | 5.90e-04 | -1.41e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 4.60e-02 | 5.16e-02 | -4.33e-04 | -2.01e-05 | -1.61e-04 | -4.86e-05 | -2.96e-04 | 1.19e-04 | 4.97e-05 | -8.78e-07 | ] |
| G [ | 5.00e-05 | 1.78e-05 | 3.18e-05 | -6.49e-05 | -2.65e-04 | 2.25e-05 | -2.58e-04 | -2.97e-04 | 4.73e-02 | 3.96e-02 | ] |
| T [ | -1.37e-05 | 2.58e-04 | 7.38e-03 | 3.04e-02 | 3.95e-03 | 3.48e-02 | 7.06e-03 | 1.31e-02 | 3.34e-06 | -3.23e-05 | ] |
