Detailed information of deep learning profile BP000880.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000880.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4 MA0148.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BLE
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.69e-04 1.18e-02 -8.90e-06 -3.35e-05 5.80e-07 1.00e-01 3.28e-06 1.48e-02 -1.18e-03 1.87e-02 ]
C [ -5.67e-05 -2.35e-05 -8.68e-06 -8.13e-06 4.58e-06 0.00e+00 6.77e-02 -1.05e-03 6.43e-03 -8.48e-04 ]
G [ -7.90e-05 6.87e-02 -3.89e-07 2.26e-03 5.38e-03 1.72e-05 -4.21e-05 -2.16e-04 -1.54e-03 -8.06e-04 ]
T [ 7.59e-02 2.71e-06 1.08e-01 7.41e-02 7.24e-02 -7.39e-06 1.76e-03 5.88e-03 1.48e-02 6.59e-03 ]

Frequency matrix

A [ 7643 23530 594 1999 1935 105535 6680 42160 16410 43817 ]
C [ 2644 1446 813 1517 1480 156 79878 20740 27009 9102 ]
G [ 2585 81608 293 14289 21029 895 2321 3214 16750 12741 ]
T [ 94329 616 105500 89396 82755 614 18321 41087 47031 41540 ]

Alternative motif patterns (AMPs)

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
Showing 1 profiles of page 2 from 2 pages