Detailed information of deep learning profile BP000880.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000880.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4 MA0148.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BLE
Model: BPNet

Contribution weight matrix (CWM)

A [ 6.59e-03 1.48e-02 5.88e-03 1.76e-03 -7.39e-06 7.24e-02 7.41e-02 1.08e-01 2.71e-06 7.59e-02 ]
C [ -8.06e-04 -1.54e-03 -2.16e-04 -4.21e-05 1.72e-05 5.38e-03 2.26e-03 -3.89e-07 6.87e-02 -7.90e-05 ]
G [ -8.48e-04 6.43e-03 -1.05e-03 6.77e-02 0.00e+00 4.58e-06 -8.13e-06 -8.68e-06 -2.35e-05 -5.67e-05 ]
T [ 1.87e-02 -1.18e-03 1.48e-02 3.28e-06 1.00e-01 5.80e-07 -3.35e-05 -8.90e-06 1.18e-02 -2.69e-04 ]

Frequency matrix

A [ 41540 47031 41087 18321 614 82755 89396 105500 616 94329 ]
C [ 12741 16750 3214 2321 895 21029 14289 293 81608 2585 ]
G [ 9102 27009 20740 79878 156 1480 1517 813 1446 2644 ]
T [ 43817 16410 42160 6680 105535 1935 1999 594 23530 7643 ]

Alternative motif patterns (AMPs)

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000287.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000465.1 FOXA1 ENCSR324RCI liver Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000816.1 FOXA1 ENCSR819LHG K562 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001033.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages