Detailed information of deep learning profile BP000880.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000880.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4 MA0148.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BLE
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.69e-04 1.18e-02 -8.90e-06 -3.35e-05 5.80e-07 1.00e-01 3.28e-06 1.48e-02 -1.18e-03 1.87e-02 ]
C [ -5.67e-05 -2.35e-05 -8.68e-06 -8.13e-06 4.58e-06 0.00e+00 6.77e-02 -1.05e-03 6.43e-03 -8.48e-04 ]
G [ -7.90e-05 6.87e-02 -3.89e-07 2.26e-03 5.38e-03 1.72e-05 -4.21e-05 -2.16e-04 -1.54e-03 -8.06e-04 ]
T [ 7.59e-02 2.71e-06 1.08e-01 7.41e-02 7.24e-02 -7.39e-06 1.76e-03 5.88e-03 1.48e-02 6.59e-03 ]

Frequency matrix

A [ 7643 23530 594 1999 1935 105535 6680 42160 16410 43817 ]
C [ 2644 1446 813 1517 1480 156 79878 20740 27009 9102 ]
G [ 2585 81608 293 14289 21029 895 2321 3214 16750 12741 ]
T [ 94329 616 105500 89396 82755 614 18321 41087 47031 41540 ]

Alternative motif patterns (AMPs)

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000287.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000465.1 FOXA1 ENCSR324RCI liver Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000816.1 FOXA1 ENCSR819LHG K562 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001033.1 FOXA1 ENCSR094WHO HEK293T Homo sapiens
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages