This page shows detailed deep learning-derived predictions and motifs for CTCF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000881.1 |
| Cell line/tissue: | HepG2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DLS |
| Model: | BPNet |
| A [ | -2.59e-03 | -1.97e-03 | 2.83e-02 | -1.85e-03 | -5.73e-03 | 8.57e-02 | -5.44e-04 | 1.44e-02 | -6.53e-03 | -1.13e-03 | -2.47e-03 | -5.17e-03 | 8.09e-03 | -4.42e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.08e-01 | 2.12e-01 | 1.21e-04 | 6.52e-02 | 1.68e-02 | -4.50e-04 | -1.36e-04 | -3.01e-04 | -4.79e-04 | -1.10e-04 | 1.36e-03 | 1.17e-01 | 1.06e-04 | 4.58e-02 | ] |
| G [ | -2.27e-03 | -6.83e-04 | 8.31e-03 | 1.54e-02 | -2.50e-03 | 1.38e-03 | 2.27e-01 | 9.75e-02 | 7.24e-02 | 2.16e-01 | 1.37e-01 | -7.31e-04 | 7.09e-02 | 1.40e-02 | ] |
| T [ | -3.83e-03 | -1.39e-03 | -7.76e-03 | -2.88e-03 | 2.34e-02 | -2.72e-03 | -4.82e-04 | -9.34e-04 | 5.32e-03 | -7.58e-04 | -1.03e-03 | -4.15e-03 | -5.33e-03 | -1.67e-03 | ] |
| A [ | 4394 | 701 | 28856 | 2854 | 6982 | 35463 | 198 | 15173 | 2978 | 54 | 818 | 5555 | 17520 | 4158 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 32656 | 41714 | 1998 | 23063 | 16797 | 1042 | 60 | 180 | 1183 | 3 | 850 | 32942 | 2202 | 22076 | ] |
| G [ | 2849 | 285 | 5228 | 15571 | 3774 | 3431 | 42595 | 27240 | 21952 | 42885 | 37838 | 1090 | 20814 | 12412 | ] |
| T [ | 3077 | 276 | 6894 | 1489 | 15423 | 3040 | 123 | 383 | 16863 | 34 | 3471 | 3389 | 2440 | 4331 | ] |
